Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924996.1_cds_XP_016473267.1_65415
CDS Infomation

[gene=LOC107795196] [db_xref=GeneID:107795196] [protein=serine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2] [protein_id=XP_016473267.1] [location=complement(join(115368..115646,116361..116454,116580..116714,117063..117229,118003..118182,119165..119257,119339..119487,119565..119613))] [gbkey=CDS]
Sequence

ATGAAAGGAAAGCTGGAACCCTCAGAGCGCCAGAAGCTCATAGAAGAAGGAAAGAATTTG
AAGGAAGCACTTGTGACTTTGGAAGAAGACTTGCTCAAACTTACAGATGAGCTGCAGCAA
GAAGCACAATCGGTACCTAATATGACACATCCAGATGTTCCAGTTGGAGGGGAAGATTCT
TCAACAGTCAGGAAAATGGTTGGTAAACCTGTAGAGTTAAGCTTTGCTGTTAAAGACCAC
GTCCAGCTGGGAAAAGAGCTAGATTTGTTTGATTTTGACGCTGCTGCTGAGGTCAGTGGG
TCCAAATTCTATTACTTGAAGAATGAAGCAGTTATTCTAGAGATGGCTCTTGTAAACTGG
GCAGTTTCAGAAGCCATGAAACGAGGCTTTACACCTCTGACTACCCCAGAGATCGTTCGG
TCATCTGTGGTGGAAAAATGTGGATTTCAACCCCGTGGAGCAAACACTCAGGTTTACTCC
ATTGAAAATAGTGACCAGTGCCTGATTGGAACCGCTGAGATTCCAGTAGGTGGAATACAC
ATGGATTCCATTCTTTCCGAGTCTTCATTGCCATTGAAATATGTGGCTTTCTCACACTGC
TTTCGGACTGAGGCTGGTGCTGCAGGCGCTGCAACAAGGGGACTTTATCGAGTTCACCAG
TTCAGCAAGGTGGAAATGTTCATACTGTGCCGACCAGATGAGAGTGATTCATACCATGAA
GAACTCATTGAGATCGAAGAAGACCTCTTCTCGTCACTAGGATTTCATTTCAAGACATTG
GACATGGCAACCCAGGATCTAGGTGCACCAGCTTATCGTAAGTTTGATGTGGAGGCATGG
ATGCCAGGGTTGGGCCGTTATGGTGAGATATCAAGTGCATCAAATTGTACAGATTATCAA
AGCCGCCGGCTGGGAATTAGGTATCGCCCTGAACCATCAGCGTCATCAAGTCCTAAAAAG
GGTAAAAACTCAGCTCCAACACAGTTCGTTCACACATTAAATGCTACAGCATGTGCAGTT
CCGCGAATGATAGTGTGCTTGCTTGAGAATTTCCAGCAAGAAGATGGCTCAGTTATTATA
CCAGAGCCATTGAGGCCTTTCATGGGTGGGCTTCACATTATTAAACCAAAACATATACAG
AACTAA

Peptide Sequence

PEP ID

XP_016473267.1
PEP Infomation

PREDICTED: serine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MKGKLEPSERQKLIEEGKNLKEALVTLEEDLLKLTDELQQEAQSVPNMTHPDVPVGGEDS
STVRKMVGKPVELSFAVKDHVQLGKELDLFDFDAAAEVSGSKFYYLKNEAVILEMALVNW
AVSEAMKRGFTPLTTPEIVRSSVVEKCGFQPRGANTQVYSIENSDQCLIGTAEIPVGGIH
MDSILSESSLPLKYVAFSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPDESDSYHE
ELIEIEEDLFSSLGFHFKTLDMATQDLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQ
SRRLGIRYRPEPSASSSPKKGKNSAPTQFVHTLNATACAVPRMIVCLLENFQQEDGSVII
PEPLRPFMGGLHIIKPKHIQN

Transcript Sequence

Gene sequence data has not been registered.